Hi!
I've been noticing a few small problems with quests not really working as intented (I think).
Here's my load order, sorted with BOSS:
So, the problems that I've had that I remember enough of are:
- Manwe's Dues - http://www.uesp.net/wiki/Morrowind:Manwe%27s_Dues - where Manwe just instantly attacked me when I entered. I was of course forced to defend myself and killed her, and I got no quest update or anything. I had to use console commands for that one.
- Unsanctioned Training - http://www.uesp.net/wiki/Morrowind:Unsanctioned_Training - where I accepted the deal of getting his training, lied to Ranis, but when asking for the training he just asks me if I want it and nothing happens. He doesn't offer any services, which he did earlier... it's gone now for some reason.
Yeah, those and possibly the Death of Ralen Hlaalo where I entered the Council Club and got attacked, I killed him and two others who attacked alongside, then this dude who fit the description (given by the scared girl, Uryne, in the manor) comes in and someone in the Council Club helps me kill him. No quest updates or anything, but I'm not sure I followed the stages correctly in that one...
Anyway, these are pretty small things, but they do break the immersion and I'm really enjoying Morroblivion! I just found out about it yesterday and then the hours flew, lots of fun!
So, is there anything I can do in load order or something to avoid these small problems? I don't want future quests to be completely broken or something. If you need to know anything more just ask, I'm not sure what info you need to help me.
Thanks in advance!

I recently completed Manwe's
I recently completed Manwe's dues quest with no problems. She did not attack me, and I had a conversation with her. this leads me to believe it is an interaction with another mod or something at your end. Maybe disable persuasion overhaul and check?
I haven't tried the other quest yet.