So I was just wondering if there was any way to make Skyblivion work with a .bsa instead of a bunch of loose files. I mean, since it's so early in development, I'm not sure about D/Ling and using this because it might cause more bugs than it's worth. Then when (or if) I go to uninstall it, I'll have to go through all those directories and manually delete each one. And besides, .bsa format is convenient for huge mods like this.
If anyone could tell me how to achieve this, I'd appreciate it.

Have you ever heard of Wrye
Have you ever heard of Wrye Bash and BAIN?