Hi all,
I just want to say that I have been enjoying Skywind for a few days now and have not ran into many issues. I've searched the forums for the problems I have experienced and could not find anything so here is a little list of problems that I have experienced:
1) All NPC's are in their underwear - found answer on forums
2) NPC's comment about my decency after starting a new character - kind of addressed on forums
3) Several lines of dialogue text from Skywind have leaked into my Skyrim game such as "Join the Morag Tong".
4) I can't enter any of the merchant buildings in Balmora
5) I can't join the fighters guild
All in all, I am very pleased with the work that the community has put in and I also wanted to mention that I do not have any performance issues with an i7-3770K and a GTX 580 3GB, I can maintain a constant 60 frames per second everywhere I have visited so far. I do notice that the graphics card memory usage has been up to 2.3GB but that may be due to the fact that I have the HD texture packs from Skyrim installed.
Thanks for all of the hard work.

Yes the Morag Tong thing
Yes the Morag Tong thing happens to everyone, everyone knows about it, it will be fixed but it's not game changing.